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| RNA promotes synapsin coacervation and modulates local translation |
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| LncRNA 3222401L13Rik Is Upregulated in Aging Astrocytes and Regulates Neuronal Support Function Through Interaction with Npas3 |
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| A novel alpha-synuclein K58N missense variant in a patient with Parkinson's disease |
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| Controlling the Formation of Multiple Condensates in the Synapse |
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| Caging-group-free photoactivatable fluorophores with far-red emission |
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| Inhibition of the Parkinson’s Disease-Related Protein DJ-1 by Endogenous Neurotoxins of the 1,2,3,4-Tetrahydroisoquinoline Family | | Laurent C, Poncet G, (...), Dairou J | ACS Chemical Neuroscience | 2025 | | |
| A correlative workflow streamlines synaptic imaging by cryo-electron tomography |
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| Neuromodulation of the endbulb of Held synapse in the cochlear nucleus |
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| Synchronization in epithelial tissue morphogenesis |
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| Alzheimer’s disease patient-derived high-molecular-weight tau impairs bursting in hippocampal neurons |
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| PP2A-B56α is a key determinant of cardiac protein phosphorylation and functional responses to β-adrenergic signalling |
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| Brain-derived synaptic vesicles have an intrinsic ability to sequester tubulin |
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| Blood-derived microRNA signatures associated with hippocampal structure and atrophy rate: Findings from the Rhineland Study |
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| Structure and function of otoferlin, a synaptic protein of sensory hair cells essential for hearing |
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| Gender-Specific Effects on the Cardiorespiratory System and Neurotoxicity of Intermittent and Permanent Low-Level Lead Exposures |
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| Complexin has a dual synaptic function as checkpoint protein in vesicle priming and as a promoter of vesicle fusion |
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| α-Synuclein triggers cofilin pathology and dendritic spine impairment via a PrPC-CCR5 dependent pathway |
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| Integrative Analysis of miRNA Expression Profiles Reveals Distinct and Common Molecular Mechanisms Underlying Broad Diagnostic Groups of Severe Mental Disorders |
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| A role for astrocytic miR-129-5p in Frontotemporal Dementia |
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| Coordinating mitochondrial translation with assembly of the OXPHOS complexes |
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| Nanobodies against the myelin enzyme CNPase as tools for structural and functional studies |
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| The lack of synapsin alters presynaptic plasticity at hippocampal mossy fibers in male mice |
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| The TOM complex from an evolutionary perspective and the functions of TOMM70 | | Özdemir M, Dennerlein S | Biological Chemistry | 2024 | | |
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| Circulating microRNAs are related to cognitive domains in the general population |
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| Calcium-triggered (de)ubiquitination events in synapses |
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| The plasma miRNAome in ADNI: Signatures to aid the detection of at‐risk individuals |
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| Membrane trafficking of synaptic adhesion molecules |
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| Lead as a toxic environmental toxicant in models of synucleinopathies |
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| Synapses learn to utilize stochastic pre-synaptic release for the prediction of postsynaptic dynamics |
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| SynapseNet: Deep Learning for Automatic Synapse Reconstruction |
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| Nanobodies against the myelin enzyme <scp>CNPase</scp> as tools for structural and functional studies |
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| The α-Synuclein Seed Amplification Assay: Interpreting a Test of Parkinson’s Pathology | | Espay AJ, Lees AJ, (...), Manfredsson FP | Parkinsonism & Related Disorders | 2024 | | |
| New insights into the molecular architecture of neurons by cryo-electron tomography |
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| Molecular Dynamics Trajectories Exploring the Impact of Phosphorylation on the Physiological Form of Human alpha-Synuclein in Aqueous Solution |
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| Defective mitochondrial COX1 translation due to loss of COX14 function triggers ROS-induced inflammation in mouse liver |
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| Paralemmin-1 controls the nanoarchitecture of the neuronal submembrane cytoskeleton |
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| Morphological correlates of synaptic protein turnover in the mouse brain |
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| A minor impact of VGLUT1 expression level on quantal size revealed through the characterization of VGLUT1<sup>mEos2</sup>knock-down new mouse model |
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| Fission of double-membrane tubes under tension |
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| Neddylation regulates the development and function of excitatory neurons |
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| Modeling Emergent Dynamics Arising from Synaptic Tagging and Capture at the Network Level | | Luboeinski J, Tetzlaff C | Synaptic Tagging and Capture | 2024 | | |
| Differences in the consolidation by spontaneous and evoked ripples in the presence of active dendrites |
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| Lead as an Environmental Toxicant in Models of Synucleinopathies |
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| Substitution of Met-38 to Ile in γ-synuclein found in two patients with amyotrophic lateral sclerosis induces aggregation into amyloid |
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| Advancing cell biology with nanoscale fluorescence imaging: essential practical considerations |
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| H3 Acetylation-Induced Basal Progenitor Generation and Neocortex Expansion Depends on the Transcription Factor Pax6 |
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| Vesicle condensation induced by synapsin: condensate size, geometry, and vesicle shape deformations |
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| Subcellular protein turnover in human neural progenitor cells revealed by correlative electron microscopy and nanoscale secondary ion mass spectrometry imaging |
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| Near-optimal information relay by the neuronal population of layer 4 barrel cortex |
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| Inhibition of 26S proteasome activity by α‐synuclein is mediated by the proteasomal chaperone Rpn14/PAAF1 |
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| Synphilin-1 as a modulator of aSyn assembly |
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| A Single-Cell Transcriptomic Analysis of the Mouse Hippocampus After Voluntary Exercise |
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| Comprehensive transcriptome analysis reveals altered mRNA splicing and post-transcriptional changes in the aged mouse brain |
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| NanoPlex: a universal strategy for fluorescence microscopy multiplexing using nanobodies with erasable signals |
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| Formation of memory assemblies through the DNA-sensing TLR9 pathway |
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| Mechanisms of simultaneous linear and nonlinear computations at the mammalian cone photoreceptor synapse |
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| Changes in α-Synuclein Posttranslational Modifications in an AAV-Based Mouse Model of Parkinson’s Disease |
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| Tunable synaptic working memory with volatile memristive devices |
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| Protein nanobarcodes enable single-step multiplexed fluorescence imaging |
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| Ketamine potentiates a central glutamatergic presynapse |
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| An intellectual-disability-associated mutation of the transcriptional regulator NACC1 impairs glutamatergic neurotransmission |
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| Intersectin and Endophilin condensates prime synaptic vesicles for release site replenishment |
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| Neuronal activity modulates the incorporation of newly translated PSD-95 into a robust structure as revealed by STED and MINFLUX |
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| DISCERN: deep single-cell expression reconstruction for improved cell clustering and cell subtype and state detection |
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| Neurofilament Levels in Dendritic Spines Associate with Synaptic Status |
| Gürth C, do Rego Barros Fernandes Lima MA, Macarrón Palacios V, Cereceda Delgado AR, Hubrich J, D’Este E | Cells | 2023 | | |
| Spatial proteomics in neurons at single-protein resolution |
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| Uncovering the molecular link between lead toxicity and Parkinson’s disease | | Shvachiy L, Geraldes V, Outeiro T | Antioxidants & Redox Signaling | 2023 | | |
| Trafficking proteins show limited differences in mobility across different postsynaptic spines |
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| Phase Separation in Biology and Disease; Current Perspectives and Open Questions |
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| Neurodegenerative disease of the brain: a survey of interdisciplinary approaches |
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| Deep learning enables fast, gentle STED microscopy |
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| Condensate biology of synaptic vesicle clusters |
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| A versatile Synaptotagmin-1 nanobody provides perturbation-free live synaptic imaging and low linkage-error in super-resolution microscopy |
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| Neuronal extracellular vesicles and associated microRNAs induce circuit connectivity downstream BDNF |
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| Alpha-synuclein oligomers activate nuclear factor of activated T-cells (NFAT) modulating apoptosis and synaptic homeostasis |
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| Conserved reduction of m6A RNA modifications during aging and neurodegeneration is linked to changes in synaptic transcripts |
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| The multifaceted mitochondrial OXA insertase |
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| Intermittent Lead Exposure Induces Behavioral and Cardiovascular Alterations Associated with Neuroinflammation |
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| Characterizing the differential distribution and targets of Sumo1 and Sumo2 in the mouse brain |
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| Impact of Phosphorylation on alpha-Synuclein Structural Determinants |
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| Reverse-time analysis uncovers universality classes in directional biological dynamics |
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| Towards a Biological Definition of Parkinson’s Disease |
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| Expansion-enhanced super-resolution radial fluctuations enable nanoscale molecular profiling of pathology specimens |
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| Reverse-time analysis and boundary classification of directional biological dynamics with multiplicative noise |
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| Chemical Synthesis of Alpha‐Synuclein Proteins via Solid‐Phase Peptide Synthesis and Native Chemical Ligation |
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| A novel miR-99b-5p-Zbp1 pathway in microglia contributes to the pathogenesis of schizophrenia |
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| Deep learning enables fast, gentle STED microscopy |
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| Is it all the RAGE? Defining the role of the receptor for advanced glycation end products in Parkinson's disease |
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| Tunable Synaptic Working Memory with Volatile Memristive Devices |
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| AI and protein structure and function in neurological disease: relevance to disease management | | Outeiro TF, Vieira TCRG | Nature Reviews Neurology | 2023 | | |
| A Versatile Synaptotagmin‐1 Nanobody Provides Perturbation‐Free Live Synaptic Imaging And Low Linkage‐Error in Super‐Resolution Microscopy |
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| Proteomic analysis of the human hippocampus identifies neuronal pentraxin 1 (NPTX1) as synapto‐axonal target in late‐stage Parkinson's disease |
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| Metabolic switch from fatty acid oxidation to glycolysis in knock-in mouse model of Barth syndrome |
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| The alpha-synuclein oligomers activate nuclear factor of activated T-cell (NFAT) modulating synaptic homeostasis and apoptosis |
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| A viral ADP-ribosyltransferase attaches RNA chains to host proteins |
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| Boosting of neural circuit chaos at the onset of collective oscillations |
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| Baseline levels of miR-223-3p correlate with the effectiveness of electroconvulsive therapy in patients with major depression |
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| Fibroblast growth factor 9 (FGF9) mediated neurodegeneration: implications for progressive multiple sclerosis? |
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| Phosphatases modified by LH signaling in ovarian follicles: testing their role in regulating the NPR2 guanylyl cyclase | | Egbert JR, Silbern I, (...), Jaffe LA | Biology of Reproduction | 2023 | | |
| Control of intracellular pH and bicarbonate by CO2 diffusion into human sperm |
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| Synapsin condensation controls synaptic vesicle sequestering and dynamics |
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| PrP meets alpha‐synuclein: Molecular mechanisms and implications for disease |
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| High-resolution analysis of bound Ca<sup>2+</sup>in neurons and synapses |
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| Mammalian oocytes store proteins for the early embryo on cytoplasmic lattices |
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| ATG9 resides on a unique population of small vesicles in presynaptic nerve terminals | | Binotti B, Ninov M, (...), Jahn R | Autophagy | 2023 | | |
| FAT10 is phosphorylated by IKKβ to inhibit the antiviral type-I interferon response |
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| Prediction mismatch responses arise as corrections of a predictive spiking code |
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| Excess Phosphoserine-129 α-Synuclein Induces Synaptic Vesicle Trafficking and Declustering Defects at a Vertebrate Synapse |
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| Developmental changes of the mitochondria in the murine anteroventral cochlear nucleus |
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| Lipid vesicle pools studied by passive X-ray microrheology |
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| Region-Specific Phosphorylation Determines Neuroligin-3 Localization to Excitatory versus Inhibitory Synapses | | Altas B, Tuffy LP, (...), Poulopoulos A | Biological Psychiatry | 2023 | | |
| B36.00008: Membrane fusion as a pathway to fission |
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| Age-dependent structural reorganization of utricular ribbon synapses |
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| Polychaetoid/ZO-1 strengthens cell junctions under tension while localizing differently than core adherens junction proteins |
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| Boosting of neural circuit chaos at the onset of collective oscillations |
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| The long-loop recycling (LLR) of synaptic components as a question of economics |
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| SparseProp: Efficient Event-Based Simulation and Training of Sparse Recurrent Spiking Neural Networks |
| Engelken R | arXiv | 2023 | | |
| Gel‐like inclusions of C‐terminal fragments of TDP‐43 sequester stalled proteasomes in neurons |
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| Visualizing proteins by expansion microscopy |
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| α-Synuclein Impacts on Intrinsic Neuronal Network Activity Through Reduced Levels of Cyclic AMP and Diminished Numbers of Active Presynaptic Terminals |
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| White matter integrity in mice requires continuous myelin synthesis at the inner tongue |
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| Visuomotor Mismatch Responses as a Hallmark of Explaining Away in Causal Inference | | Mikulasch FA, Rudelt L, Priesemann V | Neural Computation | 2022 | | |
| Stress - Regulation of SUMO conjugation and of other Ubiquitin‐Like Modifiers | | Ilic D, Magnussen HM, Tirard M | Seminars in Cell & Developmental Biology | 2022 | | |
| Npl3 functions in mRNP assembly by recruitment of mRNP components to the transcription site and their transfer onto the mRNA |
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| Phorbolester-activated Munc13-1 and ubMunc13-2 exert opposing effects on dense-core vesicle secretion |
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| Neuromodulator-dependent synaptic tagging and capture retroactively controls neural coding in spiking neural networks |
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| Environmental enrichment enhances patterning and remodeling of synaptic nanoarchitecture as revealed by STED nanoscopy |
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| Prion-like α-synuclein pathology in the brain of infants with Krabbe disease |
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| Signals from the interface: protein nanoclusters stabilize biomolecular condensates |
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| Monitoring the interactions between alpha-synuclein and Tau in vitro and in vivo using bimolecular fluorescence complementation |
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| Identification of distinct cytotoxic granules as the origin of supramolecular attack particles in T lymphocytes |
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| Colocalization of different neurotransmitter transporters on synaptic vesicles is sparse except for VGLUT1 and ZnT3 | | Upmanyu N, Jin J, (...), Sambandan S | Neuron | 2022 | | |
| Methods for multiscale structural and functional analysis of the mammalian cochlea | | Vogl C, Neef J, Wichmann C | Molecular and Cellular Neuroscience | 2022 | | |
| DiSCERN - Deep Single Cell Expression ReconstructioN for improved cell clustering and cell subtype and state detection |
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| Extracellular alpha-synuclein: Sensors, receptors, and responses |
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| The small aromatic compound SynuClean-D inhibits the aggregation and seeded polymerization of multiple α-synuclein strains |
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| Extracellular Matrix Recycling as a Novel Plasticity Mechanism With a Potential Role in Disease |
| Dankovich TM, Rizzoli SO | Frontiers in Cellular Neuroscience | 2022 | | |
| The future of Parkinson’s disease research: A new paradigm of human-specific investigation is necessary… and possible |
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| Optogenetics and electron tomography for structure-function analysis of cochlear ribbon synapses |
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| Optimal precision and accuracy in 4Pi-STORM using dynamic spline PSF models |
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| An iodine-containing probe as a tool for molecular detection in secondary ion mass spectrometry |
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| Aromaticity at position 39 in α‐synuclein: A modulator of amyloid fibril assembly and membrane‐bound conformations |
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| Resolving the molecular architecture of the photoreceptor active zone with 3D-MINFLUX |
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| JM-20, a Benzodiazepine-Dihydropyridine Hybrid Molecule, Inhibits the Formation of Alpha-Synuclein-Aggregated Species |
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| Ectosomes and exosomes modulate neuronal spontaneous activity | | Brás IC, Khani MH, (...), Outeiro TF | Journal of Proteomics | 2022 | | |
| Glycation modulates glutamatergic signaling and exacerbates Parkinson’s disease-like phenotypes |
| Chegão A, Guarda M, (...), Vicente Miranda H | npj Parkinson's Disease | 2022 | | |
| Extracellular vesicles derived from the choroid plexus trigger the differentiation of neural stem cells |
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| Focused ion beam‐scanning electron microscopy links pathological myelin outfoldings to axonal changes in mice lacking Plp1 or Mag |
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| Where is the error? Hierarchical predictive coding through dendritic error computation |
| Mikulasch FA, Rudelt L, Wibral M, Priesemann V | Trends in Neurosciences | 2022 | | |
| ERR2 and ERR3 promote the development of gamma motor neuron functional properties required for proprioceptive movement control |
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| Abstract: A10.00009 : The role of protein constriction in the fission of membrane tubes |
| Spencer RK, Müller M | APS March Meeting 2023 | 2022 | | |
| Nuclear alpha-synuclein is present in the human brain and is modified in dementia with Lewy bodies |
| Koss DJ, Erskine D, (...), Outeiro TF | Acta Neuropathologica Communications | 2022 | | |
| Optogenetics and electron tomography for structure-function analysis of cochlear ribbon synapses |
| Chakrabarti R, Jaime Tobón LM, (...), Wichmann C | eLife | 2022 | | |
| Endogenous Levels of Alpha-Synuclein Modulate Seeding and Aggregation in Cultured Cells |
| Vasili E, Dominguez-Meijide A, (...), Outeiro TF | Molecular Neurobiology | 2022 | | |
| Alpha-synuclein overexpression induces epigenomic dysregulation of glutamate signaling and locomotor pathways |
| Schaffner SL, Wassouf Z, (...), Kobor MS | Human Molecular Genetics | 2022 | | |
| Age-dependent structural reorganization of utricular ribbon synapses |
| Michanski S, Henneck T, (...), Wichmann C | bioRxiv | 2022 | | |
| Molecular Mechanisms Mediating the Transfer of Disease-Associated Proteins and Effects on Neuronal Activity | | Brás IC, Khani MH, (...), Outeiro TF | Journal of Parkinsons Disease | 2022 | | |
| Conserved reduction of m<sup>6</sup>A marks during aging and neurodegeneration is linked to altered translation of synaptic transcripts |
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| Boosting of neural circuit chaos at the onset of collective oscillations |
| Palmigiano A, Engelken R, Wolf F | bioRxiv | 2022 | | |
| From Molecular to Functional Effects of Different Environmental Lead Exposure Paradigms |
| Shvachiy L, Amaro-Leal A, Outeiro TF, Rocha I, Geraldes V | Biology (Basel) | 2022 | | |
| The Synaptic Extracellular Matrix: Long-Lived, Stable, and Still Remarkably Dynamic |
| Dankovich TM, Rizzoli SO | Frontiers in Synaptic Neuroscience | 2022 | | |
| Alpha-Synuclein Antibody Characterization: Why Semantics Matters |
| Outeiro TF | Molecular Neurobiology | 2021 | | |
| Non-negative Matrix Factorization as a Tool to Distinguish Between Synaptic Vesicles in Different Functional States | | Neher E, Taschenberger H | Neuroscience | 2021 | | |
| Exploring early time points of vimentin assembly in flow by fluorescence fluctuation spectroscopy | | Perego E, Köster S | Lab on a Chip | 2021 | | |
| NanoSIMS observations of mouse retinal cells reveal strict metabolic controls on nitrogen turnover |
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| Photoactivatable Fluorescent Dyes with Hydrophilic Caging Groups and Their Use in Multicolor Nanoscopy |
| Butkevich AN, Weber M, Cereceda Delgado AR, Ostersehlt LM, D’Este E, Hell SW | Journal of the American Chemical Society | 2021 | | |
| Evaluation and Optimization of High-Field Asymmetric Waveform Ion-Mobility Spectrometry for Multiplexed Quantitative Site-Specific N-Glycoproteomics |
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| Stable but not rigid: Chronic in vivo STED nanoscopy reveals extensive remodeling of spines, indicating multiple drivers of plasticity |
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| Correlative fluorescence microscopy, transmission electron microscopy and secondary ion mass spectrometry (CLEM-SIMS) for cellular imaging |
| Lange F, Agüi-Gonzalez P, Riedel D, Phan NTN, Jakobs S, Rizzoli SO | PLoS One | 2021 | | |
| Challenges facing quantitative large-scale optical super-resolution, and some simple solutions |
| Dankovich TM, Rizzoli SO | iScience | 2021 | | |
| Relative Quantification of Phosphorylated and Glycosylated Peptides from the Same Sample Using Isobaric Chemical Labelling with a Two-Step Enrichment Strategy | | Silbern I, Fang P, Ji Y, Christof L, Urlaub H, Pan K | Methods in Molecular Biology | 2021 | | |
| Intranuclear immunostaining-based FACS protocol from embryonic cortical tissue |
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| Exploring new roles for actin upon LTP induction in dendritic spines |
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| Lipids, lysosomes and mitochondria: insights into Lewy body formation from rare monogenic disorders |
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| Memory consolidation and improvement by synaptic tagging and capture in recurrent neural networks |
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| Correction to: The Coding and Small Non-coding Hippocampal Synaptic RNAome |
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| Sulthiame impairs mitochondrial function in vitro and may trigger onset of visual loss in Leber hereditary optic neuropathy |
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| Phagocyte-mediated synapse removal in cortical neuroinflammation is promoted by local calcium accumulation |
| Jafari M, Schumacher A, (...), Kerschensteiner M | Nature Neuroscience | 2021 | | |
| Hippocampal neurons respond to brain activity with functional hypoxia |
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| Doxycycline inhibits α-synuclein-associated pathologies in vitro and in vivo |
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| Protein phosphorylation in depolarized synaptosomes: Dissecting primary effects of calcium from synaptic vesicle cycling |
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| Monitoring mitochondrial translation in living cells |
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| Reproducing asymmetrical spine shape fluctuations in a model of actin dynamics predicts self-organized criticality |
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| Clonal expansion and activation of tissue-resident memory-like Th17 cells expressing GM-CSF in the lungs of severe COVID-19 patients |
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| The Coding and Small Non-coding Hippocampal Synaptic RNAome |
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| Cofilin pathology is a new player on α-synuclein-induced spine impairment in models of hippocampal synucleinopathy |
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| Ultrastructural maturation of endbulb of Held active zones comparing wild-type and otoferlin-deficient mice |
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| The vesicle cluster as a major organizer of synaptic composition in the short-term and long-term |
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| RIM-Binding Proteins Are Required for Normal Sound-Encoding at Afferent Inner Hair Cell Synapses |
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| The effect of polydispersity, shape fluctuations and curvature on small unilamellar vesicle small-angle X-ray scattering curves |
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| Synapsin Condensates Recruit alpha-Synuclein |
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| Presynaptic activity and protein turnover are correlated at the single-synapse level |
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| Molecular Profiling Reveals Involvement of ESCO2 in Intermediate Progenitor Cell Maintenance in the Developing Mouse Cortex |
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| Secondary Ion Mass Spectrometry Imaging Reveals Changes in the Lipid Structure of the Plasma Membranes of Hippocampal Neurons following Drugs Affecting Neuronal Activity |
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| Gold-conjugated Nanobodies for Targeted Imaging using High-resolution Secondary Ion Mass Spectrometry |
| Agüi-Gonzalez P, Dankovich TM, Opazo F, Rizzoli SO, Phan NT | Preprints | 2021 | | |
| Alpha-synuclein induces epigenomic dysregulation of glutamate signaling and locomotor pathways |
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| Super-resolution microscopy informs on the molecular architecture of alpha-synuclein inclusions in model systems and in the human brain |
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| RIM-Binding Protein 2 organizes Ca2+ channel topography and regulates release probability and vesicle replenishment at a fast central synapse |
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| Dysfunction of RAB39B‐Mediated Vesicular Trafficking in Lewy Body Diseases |
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| A large-scale nanoscopy and biochemistry analysis of postsynaptic dendritic spines |
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| Low-Expressing Synucleinopathy Mouse Models Based on Oligomer-Forming Mutations and C-Terminal Truncation of α-Synuclein |
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| Common molecular mechanisms underlie the transfer of alpha-synuclein, Tau and huntingtin and modulate spontaneous activity in neuronal cells |
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| Surface tension and viscosity of protein condensates quantified by micropipette aspiration |
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| Cellular Prion Protein Mediates α‐Synuclein Uptake, Localization, and Toxicity In Vitro and In Vivo |
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| Differences in synaptic vesicle pool behavior between male and female hippocampal cultured neurons |
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| Management of Metadata Types in Basic Cardiological Research |
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| Exercise as a model to identify microRNAs linked to human cognition: a role for microRNA-409 and microRNA-501 |
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| The mammalian rod synaptic ribbon is essential for Cav channel facilitation and ultrafast synaptic vesicle fusion |
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| Heterogeneity of glutamatergic synapses: cellular mechanisms and network consequences |
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| Interferon-driven brain phenotype in a mouse model of RNaseT2 deficient leukoencephalopathy |
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| Three-dimensional virtual histology of the cerebral cortex based on phase-contrast X-ray tomography |
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| Punctuated evolution of visual cortical circuits? Evidence from the large rodent Dasyprocta leporina, and the tiny primate Microcebus murinus |
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| Postnatal expression of the lysine methyltransferase SETD1B is essential for learning and the regulation of neuron‐enriched genes |
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| Extracellular matrix remodeling through endocytosis and resurfacing of Tenascin-R |
| Dankovich TM, Kaushik R, (...), Rizzoli SO | Nature Communications | 2021 | | |
| Endogenous Levels of Alpha-synuclein Modulate Seeding and Aggregation in Cultured Cells |
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| RIM-Binding Protein 2 Organizes Ca2+ Channel Topography and Regulates Release Probability and Vesicle Replenishment at a Fast Central Synapse |
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| A microRNA signature that correlates with cognition and is a target against cognitive decline |
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| Conditional Loss of BAF (mSWI/SNF) Scaffolding Subunits Affects Specification and Proliferation of Oligodendrocyte Precursors in Developing Mouse Forebrain |
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| Alpha-synuclein research: defining strategic moves in the battle against Parkinson’s disease |
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| Co-localization of different neurotransmitter transporters on synaptic vesicles is sparse except of VGLUT1 and ZnT3 |
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| Monitoring Alpha-Synuclein – Tau Interactions In Vitro and In Vivo Using Bimolecular Fluorescence Complementation |
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| Nuclear alpha-synuclein is present in the human brain and is modified in dementia with Lewy bodies |
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| Resolving the molecular architecture of the photoreceptor active zone by MINFLUX nanoscopy |
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| Gold-Conjugated Nanobodies for Targeted Imaging Using High-Resolution Secondary Ion Mass Spectrometry |
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| Kinetic coupling of the respiratory chain with ATP synthase, but not proton gradients, drives ATP production in cristae membranes | | Toth A, Meyrat A, (...), Ott M | Proceedings of the National Academy of Sciences of the United States of America | 2020 | | |
| MINFLUX nanoscopy delivers 3D multicolor nanometer resolution in cells | | Gwosch KC, Pape JK, (...), Hell SW | Nature Methods | 2020 | | |
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| Synucleinopathies: Where we are and where we need to go |
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| Optimizing Nervous System-Specific Gene Targeting with Cre Driver Lines: Prevalence of Germline Recombination and Influencing Factors | | Luo L, Ambrozkiewicz MC, (...), Craig AM | Neuron | 2020 | | |
| Light Microscopy of Mitochondria at the Nanoscale | | Jakobs S, Stephan T, Ilgen P, Brüser C | Annual Review of Biophysics | 2020 | | |
| Ultrastructural Correlates of Presynaptic Functional Heterogeneity in Hippocampal Synapses |
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| Protein trapping leads to altered synaptic proteostasis in synucleinopathies |
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| Tipping the Scales: Peptide-Dependent Dysregulation of Neural Circuit Dynamics in Alzheimer’s Disease | | Harris SS, Wolf F, De Strooper B, Busche MA | Neuron | 2020 | | |
| A comparative analysis of the mobility of 45 proteins in the synaptic bouton |
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| The Role of Alpha-Synuclein And Other Parkinson’s Genes in Neurodevelopmental and Neurodegenerative Disorders |
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| Developmental GABA polarity switch and neuronal plasticity in Bioengineered Neuronal Organoids |
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| Ultrastructural Imaging of Activity-Dependent Synaptic Membrane-Trafficking Events in Cultured Brain Slices |
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| A streamlined pipeline for multiplexed quantitative site-specific N-glycoproteomics |
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| Increased expression of myelin-associated genes in frontal cortex of <i>SNCA</i> overexpressing rats and Parkinson's disease patients. |
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| From iPS Cells to Rodents and Nonhuman Primates: Filling Gaps in Modeling Parkinson's Disease | | Outeiro TF, Heutink P, Bezard E, Cenci AM | Movement Disorders | 2020 | | |
| Synaptic activity and strength are reflected by changes in the post-synaptic secretory pathway |
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| A minimalist model to measure interactions between proteins and synaptic vesicles |
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| The mRNA-binding protein RBM3 regulates activity patterns and local synaptic translation in cultured hippocampal neurons |
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| Rho‐Kinase Inhibition by Fasudil Modulates Presynaptic Vesicle Dynamics |
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| Deep learning–based cell composition analysis from tissue expression profiles |
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| Distinct Mechanisms of Over-Representation of Landmarks and Rewards in the Hippocampus |
| Sato M, Mizuta K, (...), Hayashi Y | Cell Reports | 2020 | | |
| A nanobody-based fluorescent reporter reveals human α-synuclein in the cell cytosol |
| Gerdes C, Waal N, (...), Opazo F | Nature Communications | 2020 | | |
| Vesicle adhesion in the electrostatic strong-coupling regime studied by time-resolved small-angle X-ray scattering |
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| SUMOylation controls the neurodevelopmental function of the transcription factor Zbtb20 |
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| An experimentally generated peptide database increases the sensitivity of XL-MS with complex samples | | Parfentev I, Schilbach S, Cramer P, Urlaub H | Journal of Proteomics | 2020 | | |
| Modeling the Shape of Synaptic Spines by Their Actin Dynamics |
| Bonilla-Quintana M, Wörgötter F, Tetzlaff C, Fauth M | Frontiers in Synaptic Neuroscience | 2020 | | |
| The self-organized learning of noisy environmental stimuli requires distinct phases of plasticity |
| Krüppel S, Tetzlaff C | Network Neuroscience | 2020 | | |
| Editorial: Protein Misfolding and Spreading Pathology in Neurodegenerative Diseases |
| Lázaro DF, Bellucci A, Brundin P, Outeiro TF | Frontiers in Molecular Neuroscience | 2020 | | |
| Realistic in silico generation and augmentation of single-cell RNA-seq data using generative adversarial networks |
| Marouf M, Machart P, (...), Bonn S | Nature Communications | 2020 | | |
| White matter integrity requires continuous myelin synthesis at the inner tongue |
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| Post-translational modifications soften vimentin intermediate filaments |
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| The Coding And Small-Non-Coding Hippocampal Synaptic RNAome |
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| Local translation in synaptic mitochondria influences synaptic transmission |
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| RAB39B is redistributed in dementia with Lewy bodies and is sequestered within aβ plaques and Lewy bodies |
| Koss DJ, Bondarevaite O, (...), Outeiro TF | Brain Pathology | 2020 | | |
| The Role of Alpha-Synuclein and Other Parkinson’s Genes in Neurodevelopmental and Neurodegenerative Disorders |
| Morato Torres CA, Wassouf Z, Zafar F, Sastre D, Outeiro TF, Schüle B | International Journal of Molecular Sciences | 2020 | | |
| Spatial clustering of orientation preference in primary visual cortex of the large rodent agouti |
| Ferreiro DN, Conde-Ocazionez SA, (...), Schmidt KE | iScience | 2020 | | |
| Quantitative Synaptic Biology: A Perspective on Techniques, Numbers and Expectations |
| Reshetniak S, Fernández-Busnadiego R, Müller M, Rizzoli SO, Tetzlaff C | International Journal of Molecular Sciences | 2020 | | |
| A sensory cell diversifies its output by varying Ca 2+ influx‐release coupling among active zones |
| Özçete ÖD, Moser T | EMBO Journal | 2020 | | |
| Doxycycline inhibits α-synuclein-associated pathologies in vitro and in vivo |
| Dominguez-Meijide A, Parrales V, (...), Outeiro TF | bioRxiv | 2020 | | |
| Circumvention of common labelling artefacts using secondary nanobodies |
| Sograte-Idrissi S, Schlichthaerle T, (...), Opazo F | Nanoscale | 2020 | | |
| Extracellular matrix remodeling through endocytosis and resurfacing of Tenascin-R |
| Dankovich TM, Kaushik R, (...), Rizzoli SO | bioRxiv | 2020 | | |
| Correction: Circumvention of common labelling artefacts using secondary nanobodies |
| Sograte-Idrissi S, Schlichthaerle T, (...), Opazo F | Nanoscale | 2020 | | |
| Are genetic and idiopathic forms of Parkinson’s disease the same disease? |
| Correia Guedes L, Mestre T, Outeiro TF, Ferreira JJ | Journal of Neurochemistry | 2019 | | |
| A practical guide to optimization in X10 expansion microscopy | | Truckenbrodt S, Sommer C, Rizzoli SO, Danzl JG | Nature Protocols | 2019 | | |
| Principles underlying the input-dependent formation and organization of memories |
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| Cytosolic Trapping of a Mitochondrial Heat Shock Protein Is an Early Pathological Event in Synucleinopathies |
| Szegő ÉM, Dominguez-Meijide A, (...), Outeiro TF | Cell Reports | 2019 | | |
| Interrogating Synaptic Architecture: Approaches for Labeling Organelles and Cytoskeleton Components |
| Reshetniak S, Rizzoli SO | Frontiers in Synaptic Neuroscience | 2019 | | |
| Deep-learning-based cell composition analysis from tissue expression profiles | | Menden K, Marouf M, Dalmia A, Heutink P, Bonn S | bioRxiv | 2019 | | |
| Biasing the native α-synuclein conformational ensemble towards compact states abolishes aggregation and neurotoxicity |
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| A Theoretical Framework to Derive Simple, Firing-Rate-Dependent Mathematical Models of Synaptic Plasticity |
| Lappalainen J, Herpich J, Tetzlaff C | Frontiers in Computational Neuroscience | 2019 | | |
| In vitro models of synucleinopathies: informing on molecular mechanisms and protective strategies | | Marvian AT, Koss DJ, Aliakbari F, Morshedi D, Outeiro TF | Journal of Neurochemistry | 2019 | | |
| Neuronal Redox-Imbalance in Rett Syndrome Affects Mitochondria as Well as Cytosol, and Is Accompanied by Intensified Mitochondrial O2 Consumption and ROS Release |
| Can K, Menzfeld C, (...), Müller M | Frontiers in Physiology | 2019 | | |
| Translocator Protein Ligand Protects against Neurodegeneration in the MPTP Mouse Model of Parkinsonism | | Gong J, Szego ÉM, (...), Schneider A | The Journal of Neuroscience | 2019 | | |
| SIMS imaging in neurobiology and cell biology |
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| The Contribution of Iron to Protein Aggregation Disorders in the Central Nervous System |
| Joppe K, Roser A, Maass F, Lingor P | Frontiers in Neuroscience | 2019 | | |
| Correlating Synaptic Ultrastructure and Function at the Nanoscale |
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| Correlative STED super-resolution light and electron microscopy on resin sections | | Wurm CA, Schwarz H, Jans DC, Riedel D, Humbel BM, Jakobs S | Journal of Physics D-Applied Physics | 2019 | | |
| Deep Learning and Random Forest-Based Augmentation of sRNA Expression Profiles | | Fiosina J, Fiosins M, Bonn S | Lecture Notes in Computer Science | 2019 | | |
| LRRK2, alpha-synuclein, and tau: partners in crime or unfortunate bystanders? |
| Outeiro TF, Harvey K, Dominguez-Meijide A, Gerhardt E | Biochemical Society Transactions | 2019 | | |
| Epigenetics of the Synapse in Neurodegeneration |
| Xylaki M, Atzler B, Outeiro TF | Current Neurology and Neuroscience Reports | 2019 | | |
| Investigating targets for neuropharmacological intervention by molecular dynamics simulations |
| Rossetti G, Kless A, Lai L, Outeiro TF, Carloni P | Biochemical Society Transactions | 2019 | | |
| Live-cell STED nanoscopy of mitochondrial cristae |
| Stephan T, Roesch A, Riedel D, Jakobs S | Scientific Reports | 2019 | | |
| Fluorinated nanobodies for targeted molecular imaging of biological samples using nanoscale secondary ion mass spectrometry |
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| A 2A R‐induced transcriptional deregulation in astrocytes: An in vitro study | | Paiva I, Carvalho K, (...), Blum D | Glia | 2019 | | |
| Live-cell STED microscopy of mitochondrial cristae |
| Stephan T, Roesch A, Riedel D, Jakobs S | bioRxiv | 2019 | | |
| Synuclein Meeting 2019: where we are and where we need to go | | Outeiro TF, Mestre TA | Journal of Neurochemistry | 2019 | | |
| Tagger—A Swiss army knife for multiomics to dissect cell type–specific mechanisms of gene expression in mice |
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| Nanomachinery Organizing Release at Neuronal and Ribbon Synapses |
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| The self-organized learning of noisy environmental stimuli requires distinct phases of plasticity |
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| The long noncoding RNA neuroLNC regulates presynaptic activity by interacting with the neurodegeneration-associated protein TDP-43 |
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| Explainable Deep Learning for Augmentation of Small RNA Expression Profiles |
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| Explainable Deep Learning for Augmentation of sRNA Expression Profiles |
| Fiosina J, Fiosins M, Bonn S | arXiv | 2019 | | |
| Mechanisms of alpha-synuclein toxicity: An update and outlook | | Brás IC, Xylaki M, Outeiro TF | Progress in Brain Research | 2019 | | |
| A mass spectrometry workflow for measuring protein turnover rates in vivo |
| Alevra M, Mandad S, Ischebeck T, Urlaub H, Rizzoli SO, Fornasiero EF | Nature Protocols | 2019 | | |
| A combined miRNA–piRNA signature to detect Alzheimer’s disease |
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| Seeding variability of different alpha synuclein strains in synucleinopathies | | Candelise N, Schmitz M, (...), Zerr I | Annals of Neurology | 2019 | | |
| Boron‐Containing Probes for Non‐optical High‐Resolution Imaging of Biological Samples |
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| Combined Use of Unnatural Amino Acids Enables Dual-Color Super-Resolution Imaging of Proteins via Click Chemistry | | Saal K, Richter F, Rehling P, Rizzoli SO | ACS Nano | 2018 | | |
| Nanobodies reveal an extra-synaptic population of SNAP-25 and Syntaxin 1A in hippocampal neurons |
| Maidorn M, Olichon A, Rizzoli SO, Opazo F | mAbs | 2018 | | |
| The role of LRRK2 in cell signalling |
| Harvey K, Outeiro TF | Biochemical Society Transactions | 2018 | | |
| Kollaboratives Forschungszentrum (Sonderforschungsbereich, SFB) 1286 „Quantitative Synaptologie“ |
| Schubert K, Rizzoli SO | Neuroforum | 2018 | | |
| Circulating miRNAs as Diagnostic Biomarkers for Parkinson’s Disease |
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| Alpha-synuclein deregulates the expression of COL4A2 and impairs ER-Golgi function | | Paiva I, Jain G, (...), Outeiro TF | Neurobiology of Disease | 2018 | | |
| Membrane binding, internalization, and sorting of alpha-synuclein in the cell |
| Masaracchia C, Hnida M, (...), Outeiro TF | Acta Neuropathologica Communications | 2018 | | |
| Robust nanoscopy of a synaptic protein in living mice by organic-fluorophore labeling |
| Masch J, Steffens H, (...), Hell SW | Proceedings of the National Academy of Sciences of the United States of America | 2018 | | |
| Newly produced synaptic vesicle proteins are preferentially used in synaptic transmission |
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| X10 expansion microscopy enables 25‐nm resolution on conventional microscopes |
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| Sensing α-Synuclein From the Outside via the Prion Protein: Implications for Neurodegeneration | | Brás IC, Lopes LV, Outeiro TF | Movement Disorders | 2018 | | |
| Precisely measured protein lifetimes in the mouse brain reveal differences across tissues and subcellular fractions |
| Fornasiero EF, Mandad S, (...), Rizzoli SO | Nature Communications | 2018 | | |
| Nuclear localization and phosphorylation modulate pathological effects of alpha-synuclein |
| Pinho R, PaivaI , (...), Outeiro TF | Human Molecular Genetics | 2018 | | |
| Small molecule inhibits α-synuclein aggregation, disrupts amyloid fibrils, and prevents degeneration of dopaminergic neurons |
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| SUMO1-conjugation is altered during normal aging but not by increased amyloid burden |
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| WDR1 is a novel EYA3 substrate and its dephosphorylation induces modifications of the cellular actin cytoskeleton |
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| RIM-Binding Protein 2 Promotes a Large Number of CaV1.3 Ca2+-Channels and Contributes to Fast Synaptic Vesicle Replenishment at Hair Cell Active Zones |
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| Piccolo Promotes Vesicle Replenishment at a Fast Central Auditory Synapse |
| Butola T, Wichmann C, Moser T | Frontiers in Synaptic Neuroscience | 2017 | | |
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