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 External Resources

 GSE288826https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE288826  NCBI GEO Dataset (GSE288826)

 GSE288827https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE288827  NCBI GEO Dataset (GSE288827)

 10090https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=10090  NCBI taxonomy (mouse, Mus musculus)

 0009-0002-9497-1221https://orcid.org/0009-0002-9497-1221  ORCID identifier (Verena Gisa)

 0000-0003-4037-3293https://orcid.org/0000-0003-4037-3293  ORCID identifier (Md. Rezaul Islam)

 0000-0003-2950-9487 https://orcid.org/0000-0003-2950-9487  ORCID identifier (Dawid Lbik)

 0000-0002-9329-8912https://orcid.org/0000-0002-9329-8912  ORCID identifier (Tonatiuh Peña-Centeno)

 0000-0003-1950-9547https://orcid.org/0000-0003-1950-9547  ORCID identifier (Dennis Manfred Krüger)

 0000-0001-7752-349Xhttps://orcid.org/0000-0001-7752-349X  ORCID identifier (Susanne Burkhardt)

 0000-0002-2123-7694https://orcid.org/0000-0002-2123-7694  ORCID identifier (Farahnaz Sananbenesi)

 0000-0002-9644-3716https://orcid.org/0000-0002-9644-3716  ORCID identifier (Karl Toischer)

 0000-0001-8546-1161https://orcid.org/0000-0001-8546-1161  ORCID identifier (André Fischer)

 1230https://mbexc.uni-goettingen.de/archive/1230  Published Data Registry entry (MBExC)

 031t5w623https://ror.org/031t5w623  ROR identifier (031t5w623, German Centre for Cardiovascular Research)

 043j0f473https://ror.org/043j0f473  ROR identifier (043j0f473, German Center for Neurodegenerative Diseases)

 05xy1nn52https://ror.org/05xy1nn52  ROR identifier (05xy1nn52, Multiscale Bioimaging)

 021ft0n22https://ror.org/021ft0n22  ROR identifier (021ft0n22, University Medical Center Göttingen)

 SCR_015058https://scicrunch.org/resolver/SCR_015058  SciCrunch identifier (RRID:SCR_015058, bcl2fastq)

 SCR_016884https://scicrunch.org/resolver/SCR_016884  SciCrunch identifier (RRID:SCR_016884, clusterProfiler)

 SCR_011841https://scicrunch.org/resolver/SCR_011841  SciCrunch identifier (RRID:SCR_011841, cutadapt)

 SCR_015687https://scicrunch.org/resolver/SCR_015687  SciCrunch identifier (RRID:SCR_015687, DESeq2)

 SCR_018931https://scicrunch.org/resolver/SCR_018931  SciCrunch identifier (RRID:SCR_018931, EnhancedVolcano)

 SCR_014583https://scicrunch.org/resolver/SCR_014583  SciCrunch identifier (RRID:SCR_014583, FastQC)

 SCR_020132https://scicrunch.org/resolver/SCR_020132  SciCrunch identifier (RRID:SCR_020132, Illumina HiSeq2000 High Throughput Genetic Sequencer)

 SCR_010829https://scicrunch.org/resolver/SCR_010829  SciCrunch identifier (RRID:SCR_010829, miRDeep)

 SCR_007825https://scicrunch.org/resolver/SCR_007825  SciCrunch identifier (RRID:SCR_007825, NPInter)

 SCR_001905https://scicrunch.org/resolver/SCR_001905  SciCrunch identifier (RRID:SCR_001905, R Project for Statistical Computing)

 SCR_006263https://scicrunch.org/resolver/SCR_006263  SciCrunch identifier (RRID:SCR_006263, RUVSeq)

 SCR_015899https://scicrunch.org/resolver/SCR_015899  SciCrunch identifier (RRID:SCR_015899, STAR)

 SCR_005223https://scicrunch.org/resolver/SCR_005223  SciCrunch identifier (RRID:SCR_005223, STRING)

 mdpi.com...045/s1https://www.mdpi.com/article/10.3390/ncrna11030045/s1  Supplemental material